78. Gladieux P, van Oosterhout C, Fairhead S, Jouet A, Ortiz D, Ravel S, Shrestha R-K, Frouin J, He X, Zhu Y, Morel JB, Huang H, Kroj T, Jones JDG. Extensive immune receptor repertoire diversity in disease-resistant rice landraces. bioRxiv 2022.12.05.519081; doi: https://doi.org/10.1101/2022.12.05.51908
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77. Taliadoros D, Feurtey A, Wyatt N, Gladieux P, Friesen T, Stukenbrock EH. 2023. Emergence and spread of the barley net blotch pathogen coincided with crop domestication and cultivation history. PLOS Genetics. https://doi.org/10.1101/2023.07.28.550921
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76. Hensen N, Bonometti L, Westerberg I, Onut Brännström I, Guillou S, Cros-Aarteil S, Calhoun S, Haridas S, Kuo A, Mondo S, Pangilinan J, Riley R, LaButti K, Andreopoulos B, Lipzen A, Chen C, Yan M, Daum C, Ng V, Clum A, Steindorff A, Ohm RA, Martin F, Silar P, Natvig DO, Lalanne C, Gautier V, Ament-Velásquez SL, Kruys Å, Hutchinson MI, Powell AJ, Barry K, Miller AN, Grigoriev IV, Debuchy R, Gladieux P, Hiltunen Thorén M, Johannesson H. 2023. Genome-scale phylogeny and comparative genomics of the fungal order Sordariales. Molecular Phylogenetics and Evolution. https://doi.org/10.1016/j.ympev.2023.107938
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75. Bonometti L, De Bellis F, Cros-Arteil S, Gueret E, Gladieux P. 2023. Draft genome sequences of Neurospora crassa clade B, isolated from burned Cytisus sp. plants in France. Microbiology Resource Announcements, e00627-23. https://doi.org/10.1128/MRA.00627-23
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74. Le Naour—Vernet M, Charriat F, Gracy J, Cros-Arteil S, Ravel S, Veillet F, Meusnier I, Padilla A, Kroj T, Cesari S, Gladieux P. (2023). Adaptive evolution in virulence effectors of the rice blast fungus Pyricularia oryzae. PLoS Pathogens, 19(9), e1011294. https://doi.org/10.1371/journal.ppat.1011294
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73. Ali S, Gladieux P, Ravel S, Adreit H, Meusnier I, Milazzo J, Cros-Arteil S, Bonnot F, Jin B, Dumartinet T, Charriat F, Lassagne A, He X, Tharreau D, Huang H, Morel JB, Fournier E. Coevolution with Spatially Structured Rice Landraces Maintains Multiple Generalist Lineages in the Rice Blast Pathogen. Molecular Ecology. doi: 10.1111/mec.16927
72. Vittorelli N, Snirc A, Levert E, Gautier V, Lalanne C, De Filippo E, Rodríguez de la Vega RC, Gladieux P, Guillou S, Zhang Y, Tejomurthula S, Grigoriev IV, Debuchy R, Silar P, Giraud T, Hartmann FE (2023) Stepwise recombination suppression around the mating-type locus in the fungus Schizothecium tetrasporum (Ascomycota, Sordariales). PLOS Genetics. doi: 10.1371/journal.pgen.1010347
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71. Simon A, Mercier A, Gladieux P, Poinssot B, Walker AS, Viaud M (2023) Botrytis cinerea strains infecting grapevine and tomato display contrasted repertoires of accessory chromosomes, transposons and small RNAs. Peer Community Journal. doi: 10.24072/pcjournal.211
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70. Rogério F, Van Oosterhout C, Ciampi-Guillardi M, Correr FH, Hosaka GK, Cros-Arteil S, Rodrigues Alves Margarido G, Massola Junior NS, Gladieux P (2022) Means, motive and opportunity for biological invasions: Genetic introgression in a fungal pathogen. Molecular Ecology. https://doi.org/10.1111/mec.16366
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69. Caffier V, Shiller J, Bellanger MN, Collemare J, Expert P, Gladieux P, Pascouau C, Sannier M, Le Cam B (2022). Hybridizations between formae speciales of Venturia inaequalis pave the way for a new biocontrol strategy to manage fungal plant pathogens. Phytopathology. 112(7):1401-1405. https://doi.org/10.1094/phyto-05-21-0222-sc
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68. Thierry M, Charriat F, Milazzo J, Adreit H, Ravel S, Cros-Arteil S, Borron S, Sella V, Kroj T, Ioos R, Fournier E, Tharreau D, Gladieux P (2022) Maintenance of divergent lineages of the Rice Blast Fungus Pyricularia oryzae through niche separation, loss of sex and post-mating genetic incompatibilities. PLOS Pathogens. 18(7): e1010687. https://doi.org/10.1371/journal.ppat.1010687
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67. Lahfa M, Padilla A, de Guillen K, Pissarra J, Raji M, Cesari S, Kroj T, Gladieux P, Roumestand C, Barthe P (2022) 1H, 13C, 15 N backbone and side-chain NMR assignments for three MAX effectors from Magnaporthe oryzae. Biomol NMR Assign. 16(2): 305-309. https://doi.org/10.1007/s12104-022-10095-2
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66. Mercier A, Simon A, Lapalu N, Giraud T, Bardin M, Walker AS, Viaud M, Gladieux P (2021) Population genomics reveals molecular determinants of specialization to tomato in the polyphagous fungal pathogen Botrytis cinerea in France. Phytopathology. https://doi.org/10.1094/PHYTO-07-20-0302-FI
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65. Stam R, Gladieux P, Vinatzer BA, Goss EM, Potnis N, Candresse T, Brewer MT (2021) Population Genomic- and Phylogenomic-Enabled Advances to Increase Insight Into Pathogen Biology and Epidemiology. Phytopathology. 111(1): 8-11. https://doi.org/10.1094/PHYTO-11-20-0528-FI
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64. Ament-Velásquez SL, Johannesson H, Giraud T, Debuchy R, Saupe SJ, Debets AJM, Bastiaans E, Malagnac F, Grognet P, Peraza-Reyes L, Gladieux P, Kruys Å, Silar P, Huhndorf SM, Miller AN, Vogan AA (2020) The taxonomy of the model filamentous fungus Podospora anserina. MycoKeys 75: 51-69. https://doi.org/10.3897/mycokeys.75.55968
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63. Pordel A, Ravel S, Charriat F, Gladieux P, Cros-Arteil S, Milazzo J, Adreit H, Javan-Nikkah M, Mirzadi-Gohari A, Moumeni A, Tharreau D (2020) Tracing the Origin and Evolutionary History of Pyricularia oryzae Infecting Maize and Barnyard Grass. Phytopathology. 111(1): 128-136. https://doi.org/10.1094/PHYTO-09-20-0423-R
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62. Alonso P, Blondin L, Gladieux P, Mahé F, Sanguin H, Ferdinand R, Filloux D, Desmarais E, Cerqueira F, Jin B, Huang H, He X, Morel JB, Martin D, Roumagnac P, Vernière C (2020) Heterogeneity of the rice microbial community of the Chinese centuries-old Honghe Hani rice terraces system. Environmental Microbiology. 22(8), 3429–3445. doi:10.1111/1462-2920.15114
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61. Hartmann FE, Rodríguez de la Vega RC, Gladieux P, Ma WJ, Hood ME, Giraud T (2020) Higher gene flow in sex-related chromosomes than in autosomes during fungal divergence. Molecular biology and Evolution. 37(3): 668-682.https://doi.org/10.1093/molbev/msz252
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60. Daskalov A, Gladieux P, Heller J, Glass NL (2019) Programmed Cell Death in Neurospora crassa Is Controlled by the Allorecognition Determinant rcd-1. Genetics. 213(4):1387-1400. https://doi.org/10.1534/genetics.119.302617
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59. Mercier A, Carpentier F, Duplaix C, Auger A, Pradier JM, Viaud M*, Gladieux P*, Walker AS* (2019) The polyphagous plant pathogenic fungus Botrytis cinerea encompasses host-specialized and generalist populations. Environmental Microbiology. 21: 4808-4821 doi:10.1111/1462-2920.14829
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58. Hartmann FE, Rodríguez de la Vega RC, Carpentier F, Gladieux P, Cornille A, Hood ME, Giraud T (2019) Understanding Adaptation, Coevolution, Host Specialization, and Mating System in Castrating Anther-Smut Fungi by Combining Population and Comparative Genomics. Annual Review of Phytopatholology. 57: 431-457. https://doi.org/10.1146/annurev-phyto-082718-095947
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57. Alonso P, Gladieux P, Moubset O, Shih PJ, Mournet P, Frouin J, Blondin L, Ferdinand R, Fernandez E, Julian C, Filloux D, Adreit H, Fournier E, Ducasse A, Grosbois V, Morel J-B, Huang H, Jin B, He X, Martin DP, Vernière C, Roumagnac P (2019) Emergence of Southern Rice Black-Streaked Dwarf Virus in the Centuries-Old Chinese Yuanyang Agrosystem of Rice Landraces. Viruses. 11, 985. https://doi.org/10.3390/v11110985
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56. Rogério F, Gladieux P, Massola Jr NS, Ciampi-Guillardi M (2019) Multiple Introductions Without Admixture of Colletotrichum truncatum Associated with Soybean Anthracnose in Brazil. Phytopathology. 109: 681-689. https://doi.org/10.1094/phyto-08-18-0321-r
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55. Thierry M, Gladieux P, Fournier E, Tharreau D, Ioos R (2019) A genomic approach to develop a new qPCR test enabling detection of the Pyricularia oryzae lineage causing wheat blast. Plant Disease. 104: 60-70. doi: 10.1094/PDIS-04-19-0685-RE
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54. Civáň P, Ali S, Batista-Navarro R, Drosou K, Ihejieto C, Chakraborty D, Ray A, Gladieux P, Brown TA (2019) Origin of the aromatic group of cultivated rice (Oryza sativa L.) traced to the Indian subcontinent. Genome Biology and Evolution. 11: 832-843. https://doi.org/10.1093/gbe/evz039
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53. Valent B, Farman M, Tosa Y, Begerow D, Fournier E, Gladieux P, Islam MT, Kamoun S, Kemler M, Kohn LM, Lebrun M-H, Stajich J, Talbot NJ, Terauchi R, Tharreau D, Zhang N (2019) Pyricularia graminis-tritici is not the correct species name for the wheat blast fungus: Response to Ceresini et al. Molecular Plant Pathology. 20:173-179. https://doi.org/10.1111/mpp.12778
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52. Abbate JL*, Gladieux P*, Hood ME, de Vienne DM, Antonovics J, Snirc A, and Giraud T* (2018) Co-occurrence among three Divergent plant-castrating fungi in the same Silene Host Species. Molecular Ecology. 27(16). doi: 10.1111/mec.14805
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51. Gladieux P (2018) What makes a specialized endophyte special? Molecular Ecology. 25(18). https://doi.org/10.1111/mec.14775
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50. Gladieux P (2018) Updates in the language of Histoplasma biodiversity. mBio. 9:e00181. https://doi.org/10.1128/mBio.00181-18
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49. Zhang N, Cai G, Price D, Crouch JA, Gladieux P, Hillman B, Khang CH, Lebrun MH, Lee YH, Luo J, Qiu H, Veltri D, Wisecaver JH, Zhu J, Bhattacharya D (2018) Genome wide analysis of the transition to pathogenic lifestyles in Magnaporthales fungi. Scientific Reports. 8: 5862. https://doi.org/10.1038/s41598-018-24301-6
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48. Heller J, Clavé C, Gladieux P, Saupe SJ, Glass, NL (2018) NLR surveillance of essential SEC-9 SNARE proteins induces programmed cell death upon allorecognition in filamentous fungi. PNAS. 115(10):E2292-E2301. https://doi.org/10.1073/pnas.1719705115
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47. Gladieux P, Ravel S, Rieux A, Cros-Arteil S, Adreit H, Milazzo J, Thierry M, Fournier E, Terauchi R, Tharreau D. 2018. Coexistence of multiple endemic and pandemic lineages of the rice blast pathogen. mBio. 9:e01806-17. https://doi.org/10.1128/mbio.01806-17
46. Gladieux P*, Condon B*, Ravel S, Soanes D, Maciel JLN, Nhani A, Terauchi R, Lebrun MH, Tharreau D, Mitchell T, Pedley KF, Valent B, Talbot N, Farman M, Fournier E (2018) Gene flow between divergent cereal-and grass-specific lineages of the rice blast fungus Magnaporthe oryzae. mBio. 8:e01339-17. https://doi.org/10.1128/mbio.01219-17
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45. Taylor JW, Branco S, Gao C, Hann-Soden C, Montoya L, Sylvain I, Gladieux P (2017) Sources of Fungal Genetic Variation and Associating It with Phenotypic Diversity. Microbiology Spectrum. 5(5). https://doi.org/10.1128/microbiolspec.funk-0057-2016
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44. Petit E, Silver C, Cornille A, Gladieux P, Rosenthal L, Bruns E, Yee S, Antonovics J, Giraud T, Hood ME (2017) Co-occurrence and hybridization of anther-smut pathogens specialized on Dianthus hosts. Molecular Ecology. 26(7):1877-1890. https://doi.org/10.1111/mec.14073
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43. Coi A-L, Bigey F, Mallet S, Marsit S, Zara G, Gladieux P, Galeote V, Budroni M, Dequin S, Legras J-L (2017) Genomic signatures of adaptation to wine biological ageing conditions in biofilm-forming flor yeast. Molecular Ecology. 26(7):2150-2166. https://doi.org/10.1111/mec.14053
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42. Badouin H, Gladieux P, Gouzy J, Siguenza S, Aguileta G, Snirc A, Le Prieur S, Jeziorski C, Branca A, Giraud T (2017) Widespread selective sweeps throughout the genome of model plant pathogenic fungi and identification of effector candidates. Molecular Ecology. 26(7):2041-2062. https://doi.org/10.1111/mec.13976
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41. Branco S, Bi K, Liao H-L, Gladieux P, Badouin H, Ellison CE, Nguyen NH, Vilgalys R, Peay KG, Taylor JW, Bruns TD. 2017. Continental-level population differentiation and environmental adaptation in the mushroom Suillus brevipes. Molecular Ecology. 26(7):2063-2076. https://doi.org/10.1111/mec.13892
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40. Liao J, Huang H, Meusnier I, Adreit H, Ducasse A, Bonnot F, Pan L, He X, Kroj T, Fournier E, Tharreau D, Gladieux P, Morel JB (2016) Pathogen effectors and plant immunity determine specialization of the blast fungus to rice subspecies. eLife. 5:e19377. https://doi.org/10.7554/eLife.19377
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39. Islam T, Croll D, Gladieux P, Soanes D, Persoons A, Bhattacharjee P, Hossain S, Gupta D, Rahman MM, Mahboob MG, Cook N, Salam M, Bueno Sancho V, Maciel JN, Nani A, Castroagudin V, de Assis Reges JT, Ceresini P, Ravel S, Kellner R, Fournier E, Tharreau D, Lebrun MH, McDonald B, Stitt T, Swan D, Talbot N, Saunders D, Win J, Kamoun S (2016) Emergence of wheat blast in Bangladesh was caused by a South American lineage of Magnaporthe oryzae. BMC Biology. 14:84. https://doi.org/10.1186/s12915-016-0309-7
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38. Feurtey A, Gladieux P, Hood ME, Snirc A, Cornille A, Rosenthal L, Giraud T (2016). Strong phylogeographic costructure between the anther-smut fungus and its white campion host. New Phytologist. 212:668-679. https://doi.org/10.1111/nph.14125
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37. Ali S*, Soubeyrand S*, Gladieux P, Giraud T, Leconte M, Gautier A, Mboup M, Chen W, de Vallavieille-Pope C, Enjalbert J* (2016) CloNcaSe: Estimation of sex frequency and effective population size by clonemate re-sampling in partially clonal organisms. Molecular Ecology Resources. 16(4):845-61. https://doi.org/10.1111/1755-0998.12511
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36. Heller J, Zhao J, Rosenfield G, Kowbel D, Gladieux P, Glass L (2016) Characterization of greenbeard genes involved in long distance kind discrimination in a microbial eukaryote. PLOS Biology. 14(4): e1002431. https://doi.org/10.1371/journal.pbio.1002431
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35. Bueker B*, Eberlein C*, Gladieux P*, Schaefer A, Snirc A, Bennett DJ, Begerow D, Hood ME, Giraud T (2016) Distribution and population structure of the anther smut fungus Microbotryum silenes-acaulis parasitizing an arctic-alpine plant. Molecular Ecology. 25:811-824. https://doi.org/10.1111/mec.13512
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34. Lemaire C, de Gracia M, Thibault L, Michalecka M, Lindhard-Pedersen H, Guérin F, Gladieux P, Le Cam B (2016) Emergence of new virulent populations of apple scab from non-agricultural disease reservoirs. New Phytologist. 209(3):1220-9. https://doi.org/10.1111/nph.13658
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33. Gladieux P, Wilson BA, Perraudeau F, Montoya LA, Kowbel D, Hann-Soden C, Fischer M, Sylvain I, Jacobson DJ, Taylor JW (2015) Genomic Sequencing Reveals Historical, Demographic, and Selective Factors Associated with the Diversification of the Fire-Associated Fungus Neurospora discreta. Molecular Ecology. 24(22):5657-5675. https://doi.org/10.1111/mec.13417
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32. Short DPG*, Gurung S*, Gladieux P, Inderbitzin P, Atallah ZK, Nigro F, Li G, Benlioglu S, Subbarao KV (2015) Globally invading populations of the fungal plant pathogen Verticillium dahliae are dominated by multiple divergent lineages. Environmental Microbiology. 17: 2824-2840. https://doi.org/10.1111/1462-2920.12789
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31. Zhao J, Gladieux P, Hutchison E, Bueche J, Hall C, Perraudeau F, Glass NL (2015) Identification of allorecognition loci in Neurospora crassa by genomics and evolutionary approaches. Molecular Biology and Evolution. 32: 2417-2432. https://doi.org/10.1093/molbev/msv125
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30. Branco S, Gladieux P, Ellison CC, Kuo A, LaButti K, Lipzen A, Grigoriev IV, Liao H-L, Vilgalys R, Peay KG, Taylor JW, Bruns TD (2015) Genetic isolation between two recently diverged populations of a symbiotic fungus. Molecular Ecology. 24: 2747-2758. https://doi.org/10.1111/mec.13132
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29. Gladieux P, Feurtey A, Hood ME, Snirc A, Clavel J, Dutech C, Roy M, Giraud T (2015) The population biology of fungal invasions. Molecular Ecology. 24: 1969–1986. https://doi.org/10.1111/mec.13028
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28. Fontanillas E, Hood ME, Badouin H, Petit E, Barbe V, Gouzy J, de Vienne DM, Aguileta G, Poulain J, Wincker P, Chen Z, Toh SS, Cuomo C, Perlin MH, Gladieux P, Giraud T (2015) Degeneration of the non-recombining regions in the mating type chromosomes of the anther smut fungi. Molecular Biology and Evolution. 32(4):928–943. https://doi.org/10.1093/molbev/msu396
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27. Walker AS, Gladieux P, Decognet V, Fermaud M, Confais J, Roudet J, Bardin M, Bout A, Nicot PC, Poncet C, Fournier E (2015) Population structure and temporal maintenance of the multihost fungal pathogen Botrytis cinerea: causes and implications for disease management. Environmental Microbiology. 17(4): 1261-1274. https://doi.org/10.1111/1462-2920.12563
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26. Cornille A, Feurtey A, Gélin U, Ropars J, Misvanderbrugge K, Gladieux P, Giraud T (2015) Anthropogenic and natural drivers of crop-to-wild gene flow in a temperate wild fruit tree. Evolutionary Applications. 8(4): 373-384. https://doi.org/10.1111/eva.12250
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25. Ali S, Leconte M, Rahman H, Saqib MS, Gladieux P, Enjalbert J, de Vallavieille-Pope C (2014) A high virulence and pathotype diversity of Puccinia striiformis f. sp. tritici at its centre of diversity, the Himalayan region of Pakistan. European Journal of Plant Pathology. 140(2):275-290. https://doi.org/10.1007/s10658-014-0461-2
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24. Ali S, Gladieux P, Enjalbert J, Leconte M, Gautier A, Justesen AF, Hovmøller MS, de Vallavieille-Pope C (2014) Origin, migrations routes and genetic structure of worldwide populations of the wheat yellow rust pathogen Puccinia striiformis f.sp. tritici. PLOS Pathogens. 10(1): e1003903. https://doi.org/10.1371/journal.ppat.1003903
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23. Ali S, Gladieux P, Rahman H, Saqib MS, Fiaz M, Ahmed H, Leconte M, Gautier A, Justesen AF, Hovmøller MS, Enjalbert J, de Vallavieille-Pope C (2014) Inferring the contribution of sexual reproduction, migration and off-season survival to the temporal maintenance of microbial populations: a case study on the wheat fungal pathogen Puccinia striiformis f.sp. tritici. Molecular Ecology. 23(3):603-17. https://doi.org/10.1111/mec.12629
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22. Gladieux P, Ropars J, Badouin H, Branca A, Aguileta G, de Vienne DM, Rodriguez de la Vega RC, Branco S, Giraud T (2014) Fungal evolutionary genomics provides insight into the mechanisms of adaptive divergence in eukaryotes. Molecular Ecology. 23(4):753:773. https://doi.org/10.1111/mec.12631
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21. Cornille A, Giraud T, Smulders MJM, Roldan-Ruiz I, Gladieux P (2014) Th
e domestication and evolutionary ecology of apples. Trends in Genetics. 30(2):57-65. https://doi.org/10.1016/j.tig.2013.10.002
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20. Fournier E, Gladieux P, Giraud T (2013) The «Dr Jekyll and Mr Hyde fungus»: noble rot versus gray mold symptoms of Botrytis cinerea on grapes. Evolutionary Applications. 6(6): 960-969. https://doi.org/10.1111/eva.12079
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19. Gladieux P, Devier B, Aguileta G, Cruaud C, Giraud T (2013) Purifying selection after episodes of recurrent adaptive diversification in fungal pathogens. Infection Genetics and Evolution. 17:123-131. https://doi.org/10.1016/j.meegid.2013.03.012
18. Cornille A, Gladieux P*, Giraud T* (2013) Crop-to-wild gene flow and spatial genetic structure in the closest wild relatives of the cultivated apple. Evolutionary Applications. 6(5): 737-748. https://doi.org/10.1111/eva.12059
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17. Fontaine MC, Gladieux P, Hood ME, Giraud T (2013) History of the invasion of the anther smut pathogen on Silene latifolia in North America. New Phytologist. 198(3): 946-956. https://doi.org/10.1111/nph.12177
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16. Cornille A, Giraud T, Bellard C, Tellier A, Le Cam B, Smulders MJM, Kleinschmit J, Roldan-Ruiz I, Gladieux P (2013) Post-glacial recolonization history of the European crabapple (Malus sylvestris Mill.), a wild contributor to the domesticated apple. Molecular Ecology. 22(8): 2249-2263. https://doi.org/10.1111/mec.12231
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15. Cornille A, Gladieux P, Smulders MJM, Roldán-Ruiz I, Laurens F, Le Cam B, Nersesyan A, Clavel J, Olonova M, Feugey L, Gabrielyan I, Zhang XG, Tenaillon MI, Giraud T (2012) New Insight into the History of Domesticated Apple: Secondary Contribution of The European Wild Apple to the Genome of Cultivated Varieties. PLoS Genetics. 8(5): e1002703. https://doi.org/10.1371/journal.pgen.1002703
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14. Dilmaghani A*, Gladieux P*, Gout L, Giraud T, Brunner PC, Grandaubert J, Stachowiak A, Balesdent MH, Rouxel T (2012) Migration patterns and changes in population biology associated with the worldwide spread of the oilseed rape pathogen Leptosphaeria maculans. Molecular Ecology. 21(10): 2519-33. https://doi.org/10.1111/j.1365-294x.2012.05535.x
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13. Lê Van A, Gladieux P, Lemaire C, Cornille A, Giraud T, Durel CE, Caffier V, Le Cam B (2012) Evolution of pathogenicity traits in the apple scab fungal pathogen in response to the domestication of its host. Evolutionary Applications. 5: 694–704. https://doi.org/10.1111/j.1752-4571.2012.00246.x
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12. Gladieux P*, Guérin F*, Giraud T, Caffier V, Lemaire C, Parisi L, Didelot F, Le Cam B (2011) Emergence of novel fungal pathogens by ecological speciation: importance of the reduced viability of immigrants. Molecular Ecology. 20: 4521-4532. https://doi.org/10.1111/j.1365-294x.2011.05288.x
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11. Xhaard C, Fabre B, Andrieux A, Gladieux P, Barrès B, Frey P, Halkett F (2011) The genetic structure of the plant pathogenic fungus Melampsora larici-populina on its wild host is extensively impacted by host domestication. Molecular Ecology. 20: 2739-2755. https://doi.org/10.1111/j.1365-294x.2011.05138.x
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10. Gladieux P, Giraud T, Kiss L, Genton BJ, Jonot O, Shykoff J (2011) Distinct invasion sources of common ragweed (Ambrosia artemisiifolia) in Eastern and Western Europe. Biological Invasions. 13(4): 933-944. https://doi.org/10.1007/s10530-010-9880-y
9. Gladieux P*, Vercken E*, Fontaine MC, Hood ME, Jonot O, Couloux A, Giraud T (2011) Maintenance of fungal pathogen species that are specialized to different hosts: allopatric divergence and introgression through secondary contact. Molecular Biology and Evolution. 28(1):459–471. https://doi.org/10.1093/molbev/msq235
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8. Karapetyan AR, Gladieux P, Zakharov IA (2010) Genetic Polymorphism of Microbotryum violaceum s. l. Isolates Collected from Different Plant Species on the Territory of Russia. Russian Journal of Genetics. 46(11): 1395–1398. https://doi.org/10.1134/S1022795410110165
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7. Vercken E*, Fontaine MC*, Gladieux P, Hood ME, Jonot O, Giraud T (2010) Glacial refugia in pathogens: European genetic structure of anther smut pathogens on Silene latifolia and Silene dioica. PLoS Pathogens. 6(12): e1001229. https://doi.org/10.1371/journal.ppat.1001229
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6. Hood ME, Mena-Alí JI, Gibson AK, Oxelman B, Giraud T, Yockteng R, Arroyo MTK, Conti F, Pedersen A, Gladieux P, Antonovics J (2010). Distribution of the anther-smut pathogen Microbotryum on species of the Caryophyllaceae. New Phytologist. 187: 217-229. https://doi.org/10.1111/j.1469-8137.2010.03268.x
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5. Giraud T, Gladieux P, Gavrilets S (2010). Linking the emergence of fungal plant disease with ecological speciation. Trends in Ecology & Evolution. 25: 387-395. https://doi.org/10.1016/j.tree.2010.03.006
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4. Gladieux P, Caffier V, Devaux M, Le Cam B (2010). Host-specific differentiation among populations of Venturia inaequalis causing scab on apple, pyracantha and loquat. Fungal Genetics & Biology. 47: 511-521. https://doi.org/10.1016/j.fgb.2009.12.007
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3. Gladieux P, Zhang X-G, Róldan-Ruiz I, Caffier V, Leroy T, Devaux M, Van Glabeke S, Coart E, Le Cam B (2010) Evolution of the population structure of Venturia inaequalis, the apple scab fungus, associated with the domestication of its host. Molecular Ecology. 19(4): 658-674. https://doi.org/10.1111/j.1365-294x.2009.04498.x
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2. Gladieux P, Zhang X-G, Afoufa-Bastien D, Valdebenito-Sanhueza R-M, Sbaghi M, Le Cam B (2008) On the Origin and Spread of the Scab Disease of Apple. PLoS ONE 1: e1455. https://doi.org/10.1371/journal.pone.0001455
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1. Guérin F*, Gladieux P* & Le Cam B (2007) Origin and Colonization History of Newly Virulent Strains of the Phytopathogenic Fungus Venturia inaequalis. Fungal Genetics & Biology 44(4): 284-292. https://doi.org/10.1016/j.fgb.2006.10.005
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* equal contribution